FastQCFastQC Report
Wed 31 May 2023
EGAF00007936204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences562497
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29470.5239139053186062No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6890.12248954216644711No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6220.11057836752907126No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)