FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936228

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936228
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501582
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT31470.6274148593849062No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18090.3606588753184923No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8810.17564426155643545No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5460.10885558094189983No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)