FastQCFastQC Report
Wed 31 May 2023
EGAF00007936232

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936232
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502109
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30060.5986747897368898No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23680.4716107458739039No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12440.2477549695384867No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8400.16729435242148616No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7450.14837415780238952No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7100.1414035597848276No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6810.13562792142741914No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6040.12029260578878291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)