FastQCFastQC Report
Sun 21 May 2023
EGAF00007936256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences471687
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29270.6205386198898847No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15240.32309561213262183No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC13120.278150553227034No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11880.25186193386716194No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10480.22218123458988695No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9690.20543283999771034No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG9460.20055672511644376No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC8380.17766018567397449No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG8150.17278407079270788No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA7810.1655759009682268No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG7730.1638798610095254No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT7440.1577317161592327No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7330.15539966121601825No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC7210.1528556012779661No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC7060.14967552635540093No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6900.14628344643799807No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG6680.14161933655156916No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG6650.14098332156705612No Hit
CAGGACTCTCTGCCGGACACTAAAGCCTCTG6570.13928728160835468No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5550.1176627721349115No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4860.10303442749111169No Hit

[OK]Adapter Content

Adapter graph