FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455249
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64331.4130728458491946No Hit
CGTCGCGGTCAGAAAGCCAAATCTAACCCGA14600.32070361494478844No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9360.20560176958104248No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7960.17484936814798055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)