FastQCFastQC Report
Wed 31 May 2023
EGAF00007936274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457097
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG16880.36928704410661195No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG13870.3034366884928144No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG9360.20477054104489856No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8730.19098790847456884No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6850.14985878270914052No Hit
CCGACCAGCGGTCCGCTGAACATCCCGCAAC5980.13082562344535187No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5750.1257938686974537No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5090.11135492029044163No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGG4840.1058856216514219No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4790.10479176192361797No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)