FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007936302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences426630
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43761.0257131472235896No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG6830.1600918828961864No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6280.14720015001289175No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5840.136886763706256No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4940.1157912008063193No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4800.11250966879966247No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4730.11086890279633406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)