FastQCFastQC Report
Wed 31 May 2023
EGAF00007936304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433511
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22500.5190179718623057No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15200.3506254743247576No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12170.2807310541139671No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7740.17854218232063315No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4690.10818641280152061No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4540.10472629298910524No Hit
CCGCAGCTGCAGACTACCGGTCGTCCGTCTC4470.10311157040997806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)