FastQCFastQC Report
Wed 31 May 2023
EGAF00007936310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413973
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21020.5077625835501349No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13480.32562510115394No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6860.16571129034985374No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5840.14107200228034195No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5110.12343800199529921No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG4680.11305085114246581No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4630.11184304290376426No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4450.10749493324443864No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4370.10556244006251615No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4150.1002480838122293No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)