FastQCFastQC Report
Sun 21 May 2023
EGAF00007936324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences442314
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45981.0395330014424142No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10510.2376140027220481No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG5470.12366780160700318No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5020.11349403365030274No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4930.11145928005896265No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)