FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413061
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG34170.8272385918786814No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10190.2466947981048804No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9660.23386376346350782No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7110.17212954018897936No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG5650.13678367117689638No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4620.11184788687385155No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4340.1050692270633151No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)