FastQCFastQC Report
Wed 31 May 2023
EGAF00007936432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464011
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41680.8982545672408628No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15580.33576790205404616No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10780.23232207857141318No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC5700.12284191538562664No Hit
GGCGCCGAAACCGAAGAAGGTGGTGACGATC4790.10323031135037748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)