FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences422814
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA10720.2535393813828303No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8620.20387215182089527No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7730.18282270691131325No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5290.12511411637268396No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)