FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences366833
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT61461.6754217859352893No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG32540.8870521463445219No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC16360.445979505660614No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16250.4429808659526269No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6680.1820992113577568No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6450.17582932833196577No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6180.16846903086690676No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6080.16574299476873675No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5930.16165394062148172No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5850.1594731117429457No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG5510.15020458900916767No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG5210.14202648071465762No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4730.12894150744344157No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4630.12621547134527156No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4520.12321683163728453No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG4520.12321683163728453No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA4460.12158120997838254No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4120.1123126872446045No Hit
TCCGTCTATAACTCTGGCCGTAAAGGTCCGG3990.10876884031698349No Hit
ACCGCATCCGGTGAAGAAGTAGCTGTTCTGT3950.10767842587771548No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG3930.10713321865808148No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA3810.10386197534027745No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC3730.10168114646174145No Hit

[OK]Adapter Content

Adapter graph