FastQCFastQC Report
Wed 31 May 2023
EGAF00007936462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences358972
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG31740.8841915246871622No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6180.17215827418294463No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5240.14597238781854852No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4950.1378937633018731No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)