FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007936490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450717
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61931.3740329297541474No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11160.24760548193212148No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9440.20944406356982317No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG7370.16351724030822No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4940.10960314343590324No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)