FastQCFastQC Report
Sun 21 May 2023
EGAF00007936496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457478
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64681.413838479664596No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT36490.797633984585051No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18340.40089359488325127No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11750.2568429520108071No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC11240.2456948749448061No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC9710.2122506437468031No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7670.16765833548279918No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA6930.15148269424977814No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6150.13443269403118838No Hit
AAAAACGACCTGGCAAACGCGCCGATCAAAC6020.13159102732809008No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5890.12874936062499182No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5720.12503333493632482No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5530.12088012975487346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)