FastQCFastQC Report
Sun 21 May 2023
EGAF00007936524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476410
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG67141.4092903171637874No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT32530.6828152221825738No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA17270.36250288616947585No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16110.3381541109548498No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13840.2905060766986419No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13360.2804307214374174No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC10210.21431120253563107No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8840.18555445939421927No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8360.1754791041329947No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG7760.16288491005646397No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7340.15406897420289248No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7230.15176003862219517No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6540.13727671543418482No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6470.13580739279192294No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5880.12342310195000104No Hit
GCAGAAGCGCAGTCCACTCCGGAGCGTCCTG5740.12048445666547722No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5630.11817552108477991No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5440.11418735962721185No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5100.1070506496505111No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG4850.10180306878529No Hit

[OK]Adapter Content

Adapter graph