FastQCFastQC Report
Wed 31 May 2023
EGAF00007936540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472061
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47231.0005062905005921No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA10740.22751296972213336No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT9230.19552557826213135No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5300.11227362565431162No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4780.10125810011841689No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)