FastQCFastQC Report
Wed 31 May 2023
EGAF00007936544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525178
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG51560.9817623738998967No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5900.11234286280080279No Hit
ATGTCCAACATGGACATCGATGGTATTAACA5640.10739216037229282No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5450.10377433936684323No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)