FastQCFastQC Report
Wed 31 May 2023
EGAF00007936546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences464326
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA14580.31400352338658616No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11470.24702471970124437No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7620.16410883732549977No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6150.13245004587294273No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4900.10552930484185678No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4810.10359101148761862No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)