FastQCFastQC Report
Sun 21 May 2023
EGAF00007936556

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007936556
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437435
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44061.0072353606821585No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11770.26906854732703145No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8390.19179992456022038No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5770.13190531164630173No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)