FastQCFastQC Report
Wed 31 May 2023
EGAF00007938026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences415790
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13020.31313884412804543No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12810.3080882176098511No Hit
CGTCGTGAACACGGTGGCCACGACGATGATC9020.21693643425767817No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6360.15296183169388392No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6120.1471896871016619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)