FastQCFastQC Report
Sun 21 May 2023
EGAF00007938068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497197
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39510.7946548350050382No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10040.20193203096559315No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7750.15587382868360028No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6890.13857686188774268No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG6330.12731372071834707No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5920.11906749236218238No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5330.10720096863014057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)