FastQCFastQC Report
Sun 21 May 2023
EGAF00007938096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences505581
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40510.8012563763274331No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT34680.6859434986678692No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA21410.42347319222834723No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA9770.19324302139518693No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8490.16792561429325864No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8360.16535431513446908No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5200.10285196635158364No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC5130.10146742065069692No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)