FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007938178

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938178
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences520686
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18970.3643270608389701No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10010.19224638265672594No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7180.13789500773978944No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6890.1323254322182659No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6430.12349093311515962No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6350.12195449848853243No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6110.1173451946086509No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5620.10793453252055943No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)