FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007938194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475159
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44090.9278999240254314No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG9680.20372128066605075No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG8380.17636201776668442No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA5010.10543839009678865No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)