FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007938208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences500755
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44700.8926520953360426No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT34660.6921548461822647No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC19040.380225858952981No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG15440.3083344150332997No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA12680.25321764136154407No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG12570.2510209583528871No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT11290.22545955607033377No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG11050.22066679314235504No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG10420.20808579045641082No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7490.14957414304400354No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG7120.142185300196703No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6780.13539555271539974No Hit
ATGGCACGTCGCCTGCCGAAACCGACTCTGC6350.12680851913610447No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTC6160.12301424848478798No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA6150.12281455002945553No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCT5790.1156254056374874No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACC5590.11163143653083844No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA5570.11123203962017354No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5420.10823656279018681No Hit
GAACAGGGCCCGGCGGACGACCCGGGTGAGG5190.10364349831754052No Hit

[OK]Adapter Content

Adapter graph