FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007938220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495592
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8900.179583205540041No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8190.16525690487336359No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6110.1232868972864776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)