FastQCFastQC Report
Sun 21 May 2023
EGAF00007938222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485032
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43730.9015899981856867No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8860.18266836002573025No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT6160.12700192976958222No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6080.12535255405828893No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4980.1026736380280064No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)