FastQCFastQC Report
Sun 21 May 2023
EGAF00007938226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512006
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47600.9296766053522811No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16340.31913688511462757No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9710.18964621508341697No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6180.12070171052682976No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)