FastQCFastQC Report
Wed 31 May 2023
EGAF00007938298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490466
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG10030.20449939445343815No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCGCC9100.18553783544628985No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC7700.15699355306993756No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA6460.13171147439373984No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6110.12457540379965176No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5730.11682767001178472No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG4990.10173997789856992No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT4990.10173997789856992No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)