FastQCFastQC Report
Sun 21 May 2023
EGAF00007938302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences482864
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG30760.637032373504755No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11170.23132807581430795No Hit
GATGAACGTAAACGCCACACCAAAATCCACCTG6370.13192120348586767No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT6300.1304715199310779No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5720.11845985619139136No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5580.11556048908181185No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGATG4920.10189204413665132No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)