FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007938322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476427
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG47250.9917573941023494No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC15560.3265977788832287No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA15030.31547330440969973No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC14870.31211497249316267No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT10120.2124144937209688No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA8350.17526294689427763No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT7720.16203951497291294No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7520.15784160007724166No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATCCA6970.1462973341141455No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATCCG6930.14545775113501122No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAGAA6910.1450379596454441No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACCAC6890.144618168155877No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA6860.14398848092152627No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT6330.13286400644799728No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCGCG6020.12635723835970675No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCCCG5660.11880099154749836No Hit
GAACAGGGCCCGGCGGACGACCCGGGTGAGGGC5580.11712182558922983No Hit
ATTGCTGCCGTTGGCTCTCCAGTGAAGTCTACC5540.11628224261009557No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5310.11145464048007356No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGCCG5300.11124474473528999No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5190.10893589154267076No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG4950.10389839366786519No Hit
AGCCCGGCTAAATCTGCGCCGCCGTCTCCGGTA4910.10305881068873092No Hit
TCTGGCTACGAAATTGACCACATCGACCTGGAT4840.10158954047524593No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)