FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007938332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463128
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG8760.18914857231694046No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7750.16734034651327495No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT6210.13408820023837903No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5760.12437166398922113No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAGAA4910.10601820662970066No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)