FastQCFastQC Report
Wed 31 May 2023
EGAF00007938370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517329
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCGAACCTACTACTGATTACGGCGGTGACTCC15710.3036752240837069No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG12720.2458783482078136No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6140.11868656116320563No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5980.11559375175178659No Hit
GGTCCGGGCATTAACCCAATCAGCAAAACCGAA5960.1152071505753592No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)