FastQCFastQC Report
Wed 31 May 2023
EGAF00007938372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461701
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22450.4862454272353753No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG16280.3526091561421786No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7870.17045663752081974No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG6570.14229988672322563No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC6230.13493581343770103No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG6010.13017082484118508No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCGAA5210.1128435935811272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)