FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007938426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences427539
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG58871.3769504068634675No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA7080.1655989278171114No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6350.14852446209585557No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5890.13776520972355738No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5380.1258364733977485No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4400.1029145879089393No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4300.10057562000191796No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)