FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007938434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476325
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG29530.6199548627512728No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10470.21980790426704455No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG9980.20952081037107018No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8950.1878969191203485No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5270.11063874455466331No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5150.10811945625360836No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4800.10077153204219808No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)