FastQCFastQC Report
Wed 31 May 2023
EGAF00007938446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences441441
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG64921.470638205332083No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18400.41681674334735563No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16120.36516771210648763No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12990.29426355956968203No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12510.2833900793084466No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA11440.25915127955944284No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8440.1911920279267218No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG8260.18711447282875854No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7650.1732960916634386No Hit
GGTCCGGGCATTAACCCAATCAGCAAAACCG7130.16151648804710028No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6320.14316749010626562No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6020.13637156494299352No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5950.13478584907156338No Hit
CTGCCGCAGTCTCCAGGCCCAGCGTTCCCGC5710.12934910894094567No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5650.12798992390829125No Hit
GATGGCGAACACCTGGAAGGTGGCGACGGCA5220.11824909784093457No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4940.11190623435521395No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA4920.11145317267766247No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4790.1085082717735779No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4670.10578990170826905No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT4420.10012663073887564No Hit

[OK]Adapter Content

Adapter graph