FastQCFastQC Report
Sun 21 May 2023
EGAF00007938474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences423285
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT34680.8193061412523477No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19220.4540675903941789No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12640.2986167712061613No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT8360.19750286450027757No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7330.17316937760610462No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC4890.11552500088592792No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)