FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007938518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512451
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT19760.38559784252543167No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13650.26636693069191003No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8800.17172373553764164No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8370.16333268936932507No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8320.16235698632649756No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7900.15416108076674648No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6810.13289075443310677No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6550.12781709861040375No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5930.11571838087934261No Hit
AAAAACGTAAAACACGACTCCTTCAGCGGCA5930.11571838087934261No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)