FastQCFastQC Report
Sun 21 May 2023
EGAF00007938570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences429079
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46871.0923396390874407No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7750.18061941973389514No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7720.17992024778653815No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7390.172229356365611No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6010.14006744678718838No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5790.1349401858399036No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5650.1316773834189042No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)