FastQCFastQC Report
Wed 31 May 2023
EGAF00007938586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences490436
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG38050.7758402727369117No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25020.5101583081176749No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8290.16903326835713528No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6240.1272337267247918No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)