FastQCFastQC Report
Sun 21 May 2023
EGAF00007938600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452754
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40340.8909915759993287No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13680.3021508368783048No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13410.29618733351886456No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10130.2237418112264055No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7630.1685241875278849No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7110.1570389217985926No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6640.14665800854327074No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6630.14643713804847666No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG5160.11396917531374653No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4640.10248390958445425No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4560.1007169456261016No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)