FastQCFastQC Report
Wed 31 May 2023
EGAF00007938680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467216
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63291.3546197048046298No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT32330.691971165371049No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14770.31612787233313927No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12110.25919489058593886No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA11640.24913530358549366No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11140.2384336152871477No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10050.21510393479675355No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7710.1650200335604945No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6120.1309886647717544No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5280.1130098284305332No Hit
GTGGTAGAAATGGAGGGTTACCGTTACGTGG5230.11193965960069861No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)