FastQCFastQC Report
Wed 31 May 2023
EGAF00007938735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences522594
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG24590.4705373578724593No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC23350.4468095691875528No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT22610.43264943723043126No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC21430.410069767352859No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG19950.3817495034386158No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG18960.36280554311760177No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA18570.35534277086992966No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG17460.3341025729342472No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA16240.31075749051845214No Hit
CGAGATGTTTCCATCCAGAGGTCTCCGCAGCGGAAAAAATTGGC14700.2812891077968748No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA14500.27746204510576084No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA14450.27650527943298236No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA12250.234407589830729No Hit
TTCCTGGTGGTATTCGAAATAGTCTGCTTCGCCGACCGGGTGGA11420.21852527966260615No Hit
GGCTGGAATGGATTCGGAGTTGCGCGGGCCGGTCGGCAGGGTGT11360.21737716085527195No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG10510.2011121444180377No Hit
AACCCTCTTAACCGCTGTATCGGCGAGAAGCTCTTCTGAGGGGC10460.20015537874525924No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10190.1949888441122554No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT10100.19326666590125413No Hit
ATACGGATAAGAACTACGGGCAGTGGCTGTAACCCTCTTAACCG9820.1879087781336946No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG9690.18542118738447055No Hit
GATGGTGGATTCGCTACGGGAACGGCGCTGCACAACGTGACGGG8960.17145240856190466No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT8650.16552046139067805No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG8580.16418098944878817No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT8460.1618847518341198No Hit
CATGGTATCACCTGGAACAACCTGGCTAGTGTGGCCGGTTTCAG7720.1477246198769982No Hit
GTCGCCCGGTACTACCTGGGAGGTGTGGCCAGTTTCAGCAGCGG7630.1460024416659969No Hit
GATGGTGGATTCGGAACGGCTACGACGCTGAACGACGTGGCGGG7410.14179267270577162No Hit
GTTGCGCGGCGGACGAGTACGTACCGGAACGCGCAGACCGCTCA7350.1406445538984374No Hit
TTTCACGCATTTCTTGCCGTCCACTACGTAAACGCCGGACGGCA6940.13279907538165384No Hit
CACGTGACGGGTTTGGACCGTGTCAGACGGTGCCAGCGGGTTGG6860.13126825030520825No Hit
GCGCACTACAACTTTCTTACCACCCACAACATAAATACCAGCCG6800.13012013149787408No Hit
CGGTTCGCCATCCGGACCGCCTTCCTGGTGATACTCGAAGTAGT6710.12839795328687278No Hit
GTTGCGTGGGCCGGTCGGCAGGGTATCTGCTACACGAGCTACCG6570.12571900940309302No Hit
AACGTGACGGGTCTGAACGGTGTCAGACGGGGCCAGCGGGTTGG6390.12227465298109048No Hit
CAGCTCGTCTTCGTCGCCCGCTTCATCTTCGTTGTGCAGCGGGG6300.12055247477008921No Hit
CAGCACACCGTCGCCCTCGAAAGCACCGCCATCATCTTCGTCCC5960.11404646819519551No Hit
CTGAACGACGTGACGGGTCTGTACAGTGTCAGACGGGGCCAGCG5810.11117617117686004No Hit
TTCGCGGGCACGCTGCAGGATCGCGTGCTGTTGGTCCATCGCAC5760.11021940550408156No Hit
GGCAATATTTAAATATGCTCGTCAGGTGGACGGACCTTCGCCCG5720.10945399296585878No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG5690.10887993356219168No Hit
TTTCACGACCACTTTAACGGTTTCGTCACCAACAGTTACCAGTA5670.1084972272930803No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG5580.10677504908207902No Hit
GGTGGACGGGCCTTCGCCCGGGTCGTCAGCCGGACCCTGCTCGA5460.10447881146741064No Hit
GGCATCGGTGAAGCCAGTGCCGAATGCGTCACCCAGACCTTTGA5410.10352204579463216No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)