FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007938744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences414795
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10290.24807434998011063No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10030.24180619342084644No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9960.24011861280873684No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6910.16658831470967586No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6180.14898925975481866No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4720.1137911498451042No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG4560.10993382273171086No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4440.10704082739666583No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4400.10607649561831747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)