FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007938750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450537
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21880.48564268861380977No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11150.2474824487223025No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA10210.22661845752957027No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6090.13517202804653114No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5050.11208846332265718No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4810.10676148684791704No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)