FastQCFastQC Report
Wed 31 May 2023
EGAF00007938762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007938762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences404821
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12970.3203885173941075No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG11920.29445112778240257No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10130.2502340540634008No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5500.13586251701369248No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4820.11906496945563595No Hit
GTGGCAACCAACGAAATGAAGGTTATCAACG4160.10276146741399286No Hit
TCCTACACCAACGGCAAACTGACTATCACCC4100.10127933086475256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)